Both sides previous revision
Previous revision
Next revision
|
Previous revision
Last revision
Both sides next revision
|
melange:papers:spring2015 [2015/02/18 14:53] waruna |
melange:papers:spring2015 [2016/08/30 12:59] swetha |
| @INPROCEEDINGS{6012857, |
| author={de O Sandes, E. F. and de Melo, A. C. M. A.}, |
| booktitle={Parallel Distributed Processing Symposium (IPDPS), 2011 IEEE International}, |
| title={Smith-Waterman Alignment of Huge Sequences with GPU in Linear Space}, |
| year={2011}, |
| month=may, |
| pages={1199-1211}, |
| keywords={bioinformatics;cellular biophysics;coprocessors;parallel algorithms;GPU;GTX 285 Board;Myers-Miller algorithm;Smith-Waterman alignment;ancestral relationships;bioinformatics;cross-species chromosome alignments;high performance computing platform;linear space complexity;parallel algorithm;species peculiarity identification;Bioinformatics;Computer architecture;Graphics processing unit;Heuristic algorithms;Instruction sets;Mathematical model;Microprocessors}, |
| doi={10.1109/IPDPS.2011.114}, |
| ISSN={1530-2075},} |
| |
@article{Luporini:2015:COA:2695583.2687415, | @article{Luporini:2015:COA:2695583.2687415, |
author = {Luporini, Fabio and Varbanescu, Ana Lucia and Rathgeber, Florian and Bercea, Gheorghe-Teodor and Ramanujam, J. and Ham, David A. and Kelly, Paul H. J.}, | author = {Luporini, Fabio and Varbanescu, Ana Lucia and Rathgeber, Florian and Bercea, Gheorghe-Teodor and Ramanujam, J. and Ham, David A. and Kelly, Paul H. J.}, |
doi={10.1109/ASAP.2000.862383}, | doi={10.1109/ASAP.2000.862383}, |
ISSN={2160-0511},} | ISSN={2160-0511},} |
| |
| @ARTICLE{595572, |
| author={Andonov, R. and Rajopadhye, S.}, |
| journal={Parallel and Distributed Systems, IEEE Transactions on}, |
| title={Knapsack on VLSI: From algorithm to optimal circuit}, |
| year={1997}, |
| month={jun}, |
| volume={8}, |
| number={6}, |
| pages={545-561}, |
| keywords={VLSI;application specific integrated circuits;logic design;parallel algorithms;systolic arrays;NP-hard problem;application specific VLSI design;correctness preserving transformations;dynamic dependencies;linear systolic array;model of computation;nonlinear discrete optimization;parallel solution;recurrence equations;space-time transformations;systolic arrays;systolic synthesis;unbounded knapsack problem;Circuits;Computational modeling;Control system synthesis;Difference equations;NP-hard problem;Nonlinear equations;Phase change random access memory;Sufficient conditions;Systolic arrays;Very large scale integration}, |
| doi={10.1109/71.595572}, |
| ISSN={1045-9219},} |
| @inproceedings{Hoefler:2015:SBP:2807591.2807644, |
| author = {Hoefler, Torsten and Belli, Roberto}, |
| title = {Scientific Benchmarking of Parallel Computing Systems: Twelve Ways to Tell the Masses when Reporting Performance Results}, |
| booktitle = {Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis}, |
| series = {SC '15}, |
| year = {2015}, |
| isbn = {978-1-4503-3723-6}, |
| location = {Austin, Texas}, |
| pages = {73:1--73:12}, |
| articleno = {73}, |
| numpages = {12}, |
| url = {http://doi.acm.org/10.1145/2807591.2807644}, |
| doi = {10.1145/2807591.2807644}, |
| acmid = {2807644}, |
| publisher = {ACM}, |
| address = {New York, NY, USA}, |
| keywords = {benchmarking, data analysis, parallel computing, statistics}, |
| } |
| |
| |
| @inproceedings{Bender:2016:CA:2935764.2935798, |
| author = {Bender, Michael A. and Demaine, Erik D. and Ebrahimi, Roozbeh and Fineman, Jeremy T. and Johnson, Rob and Lincoln, Andrea and Lynch, Jayson and McCauley, Samuel}, |
| title = {Cache-Adaptive Analysis}, |
| booktitle = {Proceedings of the 28th ACM Symposium on Parallelism in Algorithms and Architectures}, |
| series = {SPAA '16}, |
| year = {2016}, |
| isbn = {978-1-4503-4210-0}, |
| location = {Pacific Grove, California, USA}, |
| pages = {135--144}, |
| numpages = {10}, |
| url = {http://doi.acm.org/10.1145/2935764.2935798}, |
| doi = {10.1145/2935764.2935798}, |
| acmid = {2935798}, |
| publisher = {ACM}, |
| address = {New York, NY, USA}, |
| keywords = {cache adaptive, cache oblivious, external memory, memory adaptive, paging algorithms}, |
| } |
| |
| @inproceedings{Bhaskaracharya:2016:SIA:2837614.2837636, |
| author = {Bhaskaracharya, Somashekaracharya G. and Bondhugula, Uday and Cohen, Albert}, |
| title = {SMO: An Integrated Approach to Intra-array and Inter-array Storage Optimization}, |
| booktitle = {Proceedings of the 43rd Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Languages}, |
| series = {POPL '16}, |
| year = {2016}, |
| isbn = {978-1-4503-3549-2}, |
| location = {St. Petersburg, FL, USA}, |
| pages = {526--538}, |
| numpages = {13}, |
| url = {http://doi.acm.org/10.1145/2837614.2837636}, |
| doi = {10.1145/2837614.2837636}, |
| acmid = {2837636}, |
| publisher = {ACM}, |
| address = {New York, NY, USA}, |
| keywords = {Compilers, array contraction, memory optimization, polyhedral framework, storage mapping optimization}, |
| } |
| |
| |
| @INPROCEEDINGS{7429307, |
| author={P. Chatarasi and J. Shirako and V. Sarkar}, |
| booktitle={2015 International Conference on Parallel Architecture and Compilation (PACT)}, |
| title={Polyhedral Optimizations of Explicitly Parallel Programs}, |
| year={2015}, |
| pages={213-226}, |
| doi={10.1109/PACT.2015.44}, |
| ISSN={1089-795X}, |
| month={Oct},} |
| |
| |
| @INPROCEEDINGS{7429326, |
| author={V. Porpodas and T. M. Jones}, |
| booktitle={2015 International Conference on Parallel Architecture and Compilation (PACT)}, |
| title={Throttling Automatic Vectorization: When Less is More}, |
| year={2015}, |
| pages={432-444}, |
| doi={10.1109/PACT.2015.32}, |
| ISSN={1089-795X}, |
| month={Oct},} |
| |
| |
| |