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--- melange:papers:spring2015 [2015/02/18 14:33]
waruna
+++ melange:papers:spring2015 [2015/04/17 13:23]
waruna
@@ Line 1: / Line 1: @@
+@INPROCEEDINGS{6012857,
+author={de O Sandes, E. F. and de Melo, A. C. M. A.},
+booktitle={Parallel Distributed Processing Symposium (IPDPS), 2011 IEEE International},
+title={Smith-Waterman Alignment of Huge Sequences with GPU in Linear Space},
+year={2011},
+month=may,
+pages={1199-1211},
+keywords={bioinformatics;cellular biophysics;coprocessors;parallel algorithms;GPU;GTX 285 Board;Myers-Miller algorithm;Smith-Waterman alignment;ancestral relationships;bioinformatics;cross-species chromosome alignments;high performance computing platform;linear space complexity;parallel algorithm;species peculiarity identification;Bioinformatics;Computer architecture;Graphics processing unit;Heuristic algorithms;Instruction sets;Mathematical model;Microprocessors},
+doi={10.1109/IPDPS.2011.114},
+ISSN={1530-2075},}
 @article{Luporini:2015:COA:2695583.2687415,
  author = {Luporini, Fabio and Varbanescu, Ana Lucia and Rathgeber, Florian and Bercea, Gheorghe-Teodor and Ramanujam, J. and Ham, David A. and Kelly, Paul H. J.},
@@ Line 91: / Line 102: @@
   pages={412--425},
   year={2013},
+  doi={10.1177/1094342013493939},
   publisher={Sage Publications}
 }
@@ Line 277: / Line 289: @@
 ISSN={2160-0511},}
+@ARTICLE{595572,
+author={Andonov, R. and Rajopadhye, S.},
+journal={Parallel and Distributed Systems, IEEE Transactions on},
+title={Knapsack on VLSI: From algorithm to optimal circuit},
+year={1997},
+month={jun},
+volume={8},
+number={6},
+pages={545-561},
+keywords={VLSI;application specific integrated circuits;logic design;parallel algorithms;systolic arrays;NP-hard problem;application specific VLSI design;correctness preserving transformations;dynamic dependencies;linear systolic array;model of computation;nonlinear discrete optimization;parallel solution;recurrence equations;space-time transformations;systolic arrays;systolic synthesis;unbounded knapsack problem;Circuits;Computational modeling;Control system synthesis;Difference equations;NP-hard problem;Nonlinear equations;Phase change random access memory;Sufficient conditions;Systolic arrays;Very large scale integration},
+doi={10.1109/71.595572},
+ISSN={1045-9219},}

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