- February 2013:
- The CAFA evaluation paper
finally came out in
Nature Methods.
- June 2012:
- Michael Hamilton will present our work on discovery of splicing
regulatory elements at the ISMB alternative splicing SIG.
- April 2012:
- Kiley Graim defended her Master’s thesis. She was accepted to UC
Santa Cruz’s Biomolecular Engineering
program for her PhD.
- August 2011:
- Artem Sokolov defended his PhD thesis. He is now at
Josh Stuart’s lab at UC Santa Cruz.
- July 2011:
GOstruct did very well in the CAFA automatic function prediction
competition. Details coming soon!
SpliceGrapher was presented at the
ISMB late breaking research session.
- May 2010:
The GOstruct project was funded by NSF
Michael Hamilton and Adam Labadorf have defended their master’s theses.
Adam is now at the Fraenkel lab at MIT.
- November 2008:
A tutorial
on using SVMs for biological sequence analysis published by PLoS Computational Biology
(joint work with C-S. Ong, S. Sonnenburg, B. Schoelkopf, and G. Raetsch).
CSU bioinformatics retreat
co-organized with the folks at the
CSU bioinformatics center and supported by
ISTeC.
- June 2008:
- Todd iverson defended his PhD thesis. Todd is now an assistant professor at the department
of mathematics and statistics at Saint Mary’s University
- March 2008:
- The lab’s collaboration with Reddy’s lab
on alternative splicing in plants was funded by NSF.
